Genoloom is a visual workflow platform for bioinformatics. Build, run, and share NGS pipelines through an intuitive canvas — powered by Nextflow, designed for scientists who care about clarity.
No spam. No noise. Just early access when it's ready.
// How it works
Every node has a defined type schema. Connections are validated in real time — you'll never accidentally pipe a BAM file into a tool expecting a FASTQ.
Upload FASTQ, FASTA, BAM or connect a cloud bucket. Your data arrives typed and version-tracked.
Drag tools onto the canvas. Each node declares its required inputs — incompatible connections are rejected visually before you run.
Genoloom generates and executes a Nextflow pipeline. Logs stream back to each node in real time. Outputs become inputs for the next stage.
// Core capabilities
A fluid, D3-powered canvas for constructing workflows. Nodes animate as they run. Edges glow when data flows. Pipelines that feel alive.
Every node declares its input and output types. FASTQ, BAM, VCF, FASTA — the canvas enforces compatibility so your pipeline is correct before it runs.
Under the hood, Genoloom generates and manages Nextflow pipelines. The full power of nf-core, without needing to write a single line of DSL2.
Run on Genoloom's cloud with demo datasets. Or download the application and run entirely on your own infrastructure — your data never leaves your system.
Share pipelines with colleagues. Fork workflows. Build an institutional library of validated, reproducible analysis templates.
Every node surfaces its stdout and stderr inline on the canvas. Debug failures in context, not buried in a terminal three directories deep.
// Supported workflows
Germline and somatic SNP/indel detection. GATK, DeepVariant, and custom calling strategies.
Differential expression, transcript assembly, fusion detection. STAR, Salmon, DESeq2.
Long-read first. PacBio HiFi and ONT workflows. Hifiasm, Flye, polishing and QC.
Whole-genome bisulfite and nanopore methylation calling. Bismark, Modkit, DMR analysis.
// Who it's for
IVDR-aware workflows with audit trails, ACMG classification nodes, and the reproducibility that clinical reporting demands. Local deployment keeps patient data secure.
Offer your users a self-service analysis interface. Build validated pipeline templates once, deploy to everyone. Reduce the bioinformatics bottleneck.
Scale NGS analysis across large cohorts. Per-sample cost tracking, cloud bucket integration, and shareable pipeline definitions that travel with your data.
// Early access
Genoloom is in active development. Join the waitlist for early access, and help shape what gets built next.